##FastQC	0.10.0
>>Basic Statistics	pass
#Measure	Value	
Filename	lane4_Index15_1.fq	
File type	Conventional base calls	
Encoding	Illumina 1.5	
Total Sequences	23727416	
Filtered Sequences	0	
Sequence length	90	
%GC	49	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	32.222785658581614	33.0	31.0	34.0	31.0	34.0
2	32.4523626171514	34.0	31.0	34.0	31.0	34.0
3	32.46260755912064	34.0	31.0	34.0	31.0	34.0
4	36.104711823655805	37.0	35.0	37.0	35.0	37.0
5	36.00040467954876	37.0	35.0	37.0	35.0	37.0
6	35.98403125734382	37.0	35.0	37.0	35.0	37.0
7	35.973605343287275	37.0	35.0	37.0	35.0	37.0
8	35.93875123190827	37.0	35.0	37.0	35.0	37.0
9	37.64330919978813	39.0	37.0	39.0	35.0	39.0
10-14	37.88649283175209	39.2	37.2	39.4	35.0	39.4
15-19	38.85104116689318	40.0	38.0	41.0	35.0	41.0
20-24	38.67360077473249	40.0	38.0	41.0	34.2	41.0
25-29	38.34590769597499	40.0	38.0	41.0	34.0	41.0
30-34	38.31477141042244	40.0	38.0	41.0	33.8	41.0
35-39	38.040107865095806	40.0	37.4	41.0	33.0	41.0
40-44	37.948455069865176	40.0	37.0	41.0	33.0	41.0
45-49	37.596322911858586	39.6	36.4	41.0	32.4	41.0
50-54	37.00734589893817	39.0	35.0	40.8	31.2	41.0
55-59	36.33424211047676	38.0	34.8	40.0	30.4	41.0
60-64	35.52222373477163	36.8	34.0	39.8	29.4	41.0
65-69	34.60470074786062	35.4	33.4	39.0	28.4	40.6
70-74	33.53714075734164	35.0	32.6	37.4	26.4	39.6
75-79	32.49189658916083	34.6	31.8	36.2	26.0	38.8
80-84	31.8678884291488	34.6	31.6	35.0	25.0	37.0
85-89	30.65475945631838	34.0	31.0	35.0	21.0	36.0
90	29.629243698513147	34.0	31.0	35.0	2.0	35.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
10	2.0
11	10.0
12	133.0
13	985.0
14	4563.0
15	12231.0
16	21500.0
17	30689.0
18	38818.0
19	47848.0
20	57950.0
21	68853.0
22	79937.0
23	95526.0
24	116031.0
25	144872.0
26	184727.0
27	237478.0
28	306155.0
29	391203.0
30	494343.0
31	623242.0
32	787808.0
33	1015176.0
34	1388681.0
35	2015658.0
36	3139492.0
37	4648468.0
38	5182233.0
39	2557854.0
40	34950.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	27.154375255536866	12.958503430885859	10.362768196546838	49.52435311703044
2	22.603152188749622	19.18231784110968	35.02755041590542	23.18697955423528
3	25.642425622747965	21.532589136549888	23.083141459651568	29.74184378105058
4	27.759487168767134	27.8692462761221	19.584606263067162	24.7866602920436
5	29.34687772496029	29.97890625230482	21.378667119588695	19.29554890314619
6	24.138633553691648	33.03790855270544	21.665460748022454	21.157997145580453
7	21.425139593793105	19.024094321943867	37.48500468824755	22.06576139601548
8	21.56925558181304	22.1764729880405	29.150907119426744	27.10336431071972
9	21.64908306913825	21.009291530101716	31.528165561728255	25.813459839031776
10-14	24.634471785718258	26.290634428966055	24.70724751485792	24.36764627045777
15-19	25.002661056728638	25.16172262500055	25.12265979574008	24.712956522530728
20-24	24.780340385824907	25.39324236059453	25.42990206291239	24.396515190668172
25-29	24.69328484438573	25.406550812540246	25.357352411751684	24.542811931322348
30-34	24.7136695279547	25.33878841674027	25.314599946206446	24.632942109098583
35-39	24.730401618636797	25.46244956290159	25.27369463926829	24.533454179193328
40-44	24.67228194965026	25.308937501401374	25.430174879953686	24.588605668994678
45-49	24.620231505033914	25.373004416750465	25.36332338512153	24.643440693094092
50-54	24.651400050960376	25.44606409078618	25.388989313284704	24.513546544968737
55-59	24.682796008632447	25.38548108367985	25.34288460734763	24.588838300340072
60-64	24.5871637938306	25.413831257774817	25.453541445138438	24.545463503256144
65-69	24.603269182739716	25.514447053992185	25.434762800371114	24.447520962896984
70-74	24.67240751354601	25.456476918448857	25.34412657121959	24.526988996785544
75-79	24.633208432578286	25.422640389480698	25.419469282650535	24.524681895290474
80-84	24.57558534174555	25.555397294130866	25.422129523622512	24.446887840501073
85-89	24.651590814531296	25.537548948009746	25.341593383732842	24.46926685372612
90	24.40371889248497	25.645490735811222	25.516621019777247	24.43416935192656
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	76.6787283725673
2	45.790131742984904
3	55.38426940379855
4	52.54614746081073
5	48.642426628106485
6	45.2966306992721
7	43.49090098980859
8	48.67261989253275
9	47.46254290817002
10-14	49.00211805617603
15-19	49.715617579259366
20-24	49.176855576493075
25-29	49.23609677570808
30-34	49.34661163705328
35-39	49.26385579783012
40-44	49.26088761864494
45-49	49.263672198128006
50-54	49.164946595929116
55-59	49.27163430897252
60-64	49.13262729708674
65-69	49.050790145636704
70-74	49.19939651033155
75-79	49.157890327868756
80-84	49.02247318224663
85-89	49.120857668257415
90	48.83788824441153
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	2.0
1	1.0
2	1.5
3	2.5
4	2.0
5	2.5
6	11.0
7	22.5
8	28.0
9	42.5
10	55.0
11	71.0
12	119.5
13	220.0
14	379.5
15	644.0
16	1114.5
17	1976.0
18	3361.5
19	5828.5
20	7474.0
21	10326.0
22	17572.5
23	28420.0
24	43647.0
25	65107.5
26	93418.0
27	128960.0
28	168110.0
29	210967.0
30	234592.0
31	258075.5
32	306261.5
33	360149.0
34	418812.5
35	474462.5
36	531690.0
37	596847.0
38	653377.0
39	699775.0
40	723744.0
41	739010.0
42	770533.0
43	799611.5
44	817800.0
45	826008.5
46	827176.5
47	823073.5
48	823452.0
49	824863.0
50	823466.0
51	815287.5
52	805502.0
53	791861.5
54	782466.0
55	781580.0
56	768431.5
57	748043.0
58	722033.0
59	690655.5
60	674524.0
61	654636.5
62	613178.0
63	562492.0
64	504145.0
65	446696.5
66	386656.5
67	325213.5
68	269614.0
69	216294.5
70	188955.0
71	165736.5
72	123031.0
73	87908.0
74	58945.0
75	36039.0
76	20485.5
77	10690.5
78	4951.0
79	2075.5
80	1119.0
81	787.5
82	331.0
83	151.0
84	73.5
85	40.0
86	23.0
87	11.5
88	4.5
89	2.5
90	2.0
91	1.5
92	1.5
93	1.5
94	1.0
95	1.0
96	1.0
97	0.5
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.17695985100105296
2	0.05280389571287493
3	0.0
4	0.0
5	2.5287203629758922E-5
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	8.429067876586308E-7
25-29	9.356265343010803E-4
30-34	0.0017254301943372171
35-39	0.003719747653937538
40-44	0.0031187551143369344
45-49	0.002553164659817993
50-54	0.01306926974264707
55-59	0.0024056559719777323
60-64	1.4329415390196725E-5
65-69	7.586161088927677E-5
70-74	0.00538027402562504
75-79	0.002885269934155493
80-84	6.271226500180213E-4
85-89	8.429067876586308E-4
90	0.0014835159462791903
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
90	2.3727416E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Duplicate Percentage	56.18079803501336
#Duplication Level	Relative count
1	100.0
2	32.89919106656115
3	17.76576101292535
4	11.245933350918843
5	7.585949177877429
6	5.659236788885958
7	4.408467422843577
8	3.4731381341774377
9	2.8466543568099887
10++	33.93453794073683
>>END_MODULE
>>Overrepresented sequences	pass
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
CCAGG	4927675	2.5632925	5.040701	1
GAAGA	5105015	2.5628197	5.1967154	2
CCTGG	4949125	2.5624125	6.145462	1
CTTCT	5179815	2.543531	5.298827	1
AAGAA	5123165	2.5164936	5.030817	2
CTGGA	4800555	2.4417129	8.303013	1
TCCAG	4651715	2.356515	5.264295	2
CTCCT	4609460	2.3148654	6.798632	1
CTGGG	4366940	2.270094	7.994871	1
CAGGA	4338250	2.2169359	5.4427924	1
CTTCA	4484055	2.212224	5.431724	1
CTCCA	4323725	2.18157	7.255225	1
CCCAG	4207625	2.1799529	6.8633566	1
CTCTG	4065315	2.0498207	6.122645	1
CTGAA	3738180	1.8603721	5.2433105	1
TGGAA	3718835	1.8582002	5.125127	2
CTCAG	3455070	1.7503059	5.823938	1
CTTGG	3233685	1.637063	5.136102	1
>>END_MODULE
